Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ccl3P10855 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ccl3P10855 Gm11452-201ENSMUST00000122376 690 ntBASIC15.01□□□□□ -0.01
Ccl3P10855 Gm10052-201ENSMUST00000168019 960 ntBASIC15.01□□□□□ -0.01
Ccl3P10855 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccl3P10855 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Gm7729-201ENSMUST00000050143 801 ntBASIC15.01□□□□□ -0.01
Ccl3P10855 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccl3P10855 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ccl3P10855 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccl3P10855 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ccl3P10855 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Gm15372-201ENSMUST00000120729 834 ntBASIC15□□□□□ -0.01
Ccl3P10855 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15□□□□□ -0.01
Ccl3P10855 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15□□□□□ -0.01
Ccl3P10855 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ccl3P10855 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15□□□□□ -0.01
Ccl3P10855 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccl3P10855 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccl3P10855 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.99□□□□□ -0.01
Ccl3P10855 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.99□□□□□ -0.01
Ccl3P10855 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.99□□□□□ -0.01
Ccl3P10855 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.99□□□□□ -0.01
Ccl3P10855 Gm44450-201ENSMUST00000199528 114 ntBASIC14.99□□□□□ -0.01
Ccl3P10855 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ccl3P10855 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ccl3P10855 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccl3P10855 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ccl3P10855 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ccl3P10855 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccl3P10855 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccl3P10855 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Gm29707-201ENSMUST00000196325 491 ntBASIC14.98□□□□□ -0.01
Ccl3P10855 AW822252-206ENSMUST00000208904 237 ntBASIC14.98□□□□□ -0.01
Ccl3P10855 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccl3P10855 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccl3P10855 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccl3P10855 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccl3P10855 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccl3P10855 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.98□□□□□ -0.01
Ccl3P10855 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms