Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc6P10629 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc6P10629 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc6P10629 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc6P10629 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.86■□□□□ 0.61
Hoxc6P10629 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc6P10629 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxc6P10629 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.85■□□□□ 0.61
Hoxc6P10629 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.85■□□□□ 0.61
Hoxc6P10629 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Gm10052-201ENSMUST00000168019 960 ntBASIC18.85■□□□□ 0.61
Hoxc6P10629 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.85■□□□□ 0.61
Hoxc6P10629 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.85■□□□□ 0.61
Hoxc6P10629 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.85■□□□□ 0.61
Hoxc6P10629 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Gm7729-201ENSMUST00000050143 801 ntBASIC18.85■□□□□ 0.61
Hoxc6P10629 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxc6P10629 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.85■□□□□ 0.61
Hoxc6P10629 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxc6P10629 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hoxc6P10629 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Gm11452-201ENSMUST00000122376 690 ntBASIC18.84■□□□□ 0.61
Hoxc6P10629 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.84■□□□□ 0.61
Hoxc6P10629 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.84■□□□□ 0.61
Hoxc6P10629 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxc6P10629 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.84■□□□□ 0.61
Hoxc6P10629 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.83■□□□□ 0.61
Hoxc6P10629 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc6P10629 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc6P10629 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.83■□□□□ 0.61
Hoxc6P10629 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc6P10629 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxc6P10629 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Hoxc6P10629 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.83■□□□□ 0.6
Hoxc6P10629 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Gm44450-201ENSMUST00000199528 114 ntBASIC18.83■□□□□ 0.6
Hoxc6P10629 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxc6P10629 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.82■□□□□ 0.6
Hoxc6P10629 Gm29707-201ENSMUST00000196325 491 ntBASIC18.82■□□□□ 0.6
Hoxc6P10629 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.82■□□□□ 0.6
Hoxc6P10629 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.82■□□□□ 0.6
Hoxc6P10629 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.82■□□□□ 0.6
Hoxc6P10629 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Hoxc6P10629 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxc6P10629 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.81■□□□□ 0.6
Hoxc6P10629 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.81■□□□□ 0.6
Hoxc6P10629 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.81■□□□□ 0.6
Hoxc6P10629 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxc6P10629 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Gm13312-201ENSMUST00000119631 718 ntBASIC18.8■□□□□ 0.6
Hoxc6P10629 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxc6P10629 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms