Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.05□□□□□ -0.48
Sh2d1aO88890 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Mir8112-201ENSMUST00000184382 131 ntBASIC12.05□□□□□ -0.48
Sh2d1aO88890 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.05□□□□□ -0.48
Sh2d1aO88890 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.05□□□□□ -0.48
Sh2d1aO88890 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh2d1aO88890 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Gm18025-201ENSMUST00000221733 862 ntBASIC12.04□□□□□ -0.48
Sh2d1aO88890 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh2d1aO88890 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.03□□□□□ -0.48
Sh2d1aO88890 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Gm11643-201ENSMUST00000119578 864 ntBASIC12.03□□□□□ -0.48
Sh2d1aO88890 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Gm18666-201ENSMUST00000190039 958 ntBASIC12.03□□□□□ -0.48
Sh2d1aO88890 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh2d1aO88890 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh2d1aO88890 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.02□□□□□ -0.48
Sh2d1aO88890 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.02□□□□□ -0.48
Sh2d1aO88890 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh2d1aO88890 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sh2d1aO88890 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.02□□□□□ -0.49
Sh2d1aO88890 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Gm12382-201ENSMUST00000122005 922 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms