Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.14■□□□□ 0.17
Tgfbr3O88393 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Tgfbr3O88393 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Phf7-203ENSMUST00000226565 1971 ntBASIC16.13■□□□□ 0.17
Tgfbr3O88393 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.13■□□□□ 0.17
Tgfbr3O88393 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Tgfbr3O88393 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.13■□□□□ 0.17
Tgfbr3O88393 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Gm43514-201ENSMUST00000198852 424 ntBASIC16.12■□□□□ 0.17
Tgfbr3O88393 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Rarb-207ENSMUST00000225921 2756 ntBASIC16.12■□□□□ 0.17
Tgfbr3O88393 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Tgfbr3O88393 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Gm6443-201ENSMUST00000203599 874 ntBASIC16.11■□□□□ 0.17
Tgfbr3O88393 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tgfbr3O88393 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.1■□□□□ 0.17
Tgfbr3O88393 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.1■□□□□ 0.17
Tgfbr3O88393 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms