Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.48■□□□□ 0.39
Trove2O08848 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trove2O08848 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Gm5408-201ENSMUST00000197998 747 ntBASIC17.47■□□□□ 0.39
Trove2O08848 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.47■□□□□ 0.39
Trove2O08848 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.47■□□□□ 0.39
Trove2O08848 Rab3c-203ENSMUST00000224180 967 ntBASIC17.47■□□□□ 0.39
Trove2O08848 Gm10602-201ENSMUST00000098239 609 ntBASIC17.47■□□□□ 0.39
Trove2O08848 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trove2O08848 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trove2O08848 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.46■□□□□ 0.39
Trove2O08848 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trove2O08848 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trove2O08848 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.46■□□□□ 0.38
Trove2O08848 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trove2O08848 Gm2399-201ENSMUST00000104944 225 ntBASIC17.45■□□□□ 0.38
Trove2O08848 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.45■□□□□ 0.38
Trove2O08848 Gm44549-201ENSMUST00000208351 577 ntBASIC17.45■□□□□ 0.38
Trove2O08848 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.45■□□□□ 0.38
Trove2O08848 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trove2O08848 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trove2O08848 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.45■□□□□ 0.38
Trove2O08848 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trove2O08848 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Trove2O08848 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.44■□□□□ 0.38
Trove2O08848 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trove2O08848 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trove2O08848 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Trove2O08848 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trove2O08848 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.44■□□□□ 0.38
Trove2O08848 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.44■□□□□ 0.38
Trove2O08848 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.44■□□□□ 0.38
Trove2O08848 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms