Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc2O08811 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc2O08811 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.42■□□□□ 0.38
Ercc2O08811 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc2O08811 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ercc2O08811 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.42■□□□□ 0.38
Ercc2O08811 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc2O08811 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ercc2O08811 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ercc2O08811 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ercc2O08811 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.41■□□□□ 0.38
Ercc2O08811 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Gm27000-201ENSMUST00000182943 842 ntBASIC17.41■□□□□ 0.38
Ercc2O08811 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.41■□□□□ 0.38
Ercc2O08811 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ercc2O08811 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ercc2O08811 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ercc2O08811 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ercc2O08811 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.4■□□□□ 0.38
Ercc2O08811 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.4■□□□□ 0.38
Ercc2O08811 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.4■□□□□ 0.38
Ercc2O08811 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.4■□□□□ 0.38
Ercc2O08811 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.4■□□□□ 0.38
Ercc2O08811 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ercc2O08811 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ercc2O08811 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ercc2O08811 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.39■□□□□ 0.38
Ercc2O08811 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Gm15565-201ENSMUST00000118890 427 ntBASIC17.39■□□□□ 0.37
Ercc2O08811 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.39■□□□□ 0.37
Ercc2O08811 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ercc2O08811 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ercc2O08811 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ercc2O08811 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ercc2O08811 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.38■□□□□ 0.37
Ercc2O08811 Gm13559-201ENSMUST00000120476 863 ntBASIC17.38■□□□□ 0.37
Ercc2O08811 Gm18958-201ENSMUST00000174258 762 ntBASIC17.38■□□□□ 0.37
Ercc2O08811 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ercc2O08811 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ercc2O08811 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.38■□□□□ 0.37
Ercc2O08811 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ercc2O08811 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ercc2O08811 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.37■□□□□ 0.37
Ercc2O08811 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ercc2O08811 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.37■□□□□ 0.37
Ercc2O08811 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ercc2O08811 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ercc2O08811 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ercc2O08811 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc2O08811 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.36■□□□□ 0.37
Ercc2O08811 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ercc2O08811 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ercc2O08811 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms