Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.4■□□□□ 0.54
Ube3aO08759 Mir6349-201ENSMUST00000184059 97 ntBASIC18.4■□□□□ 0.54
Ube3aO08759 Gm26524-201ENSMUST00000192339 390 ntBASIC18.4■□□□□ 0.54
Ube3aO08759 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3aO08759 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3aO08759 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3aO08759 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ube3aO08759 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.39■□□□□ 0.53
Ube3aO08759 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Ube3aO08759 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube3aO08759 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ube3aO08759 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ube3aO08759 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.38■□□□□ 0.53
Ube3aO08759 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.38■□□□□ 0.53
Ube3aO08759 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ube3aO08759 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ube3aO08759 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ube3aO08759 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.38■□□□□ 0.53
Ube3aO08759 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube3aO08759 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.37■□□□□ 0.53
Ube3aO08759 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.37■□□□□ 0.53
Ube3aO08759 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.37■□□□□ 0.53
Ube3aO08759 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.37■□□□□ 0.53
Ube3aO08759 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube3aO08759 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube3aO08759 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ube3aO08759 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ube3aO08759 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Ube3aO08759 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube3aO08759 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube3aO08759 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.36■□□□□ 0.53
Ube3aO08759 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.36■□□□□ 0.53
Ube3aO08759 Rab3c-203ENSMUST00000224180 967 ntBASIC18.36■□□□□ 0.53
Ube3aO08759 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube3aO08759 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube3aO08759 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms