Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.07■□□□□ 0
Raet1bO08603 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.07■□□□□ 0
Raet1bO08603 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raet1bO08603 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raet1bO08603 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.07■□□□□ 0
Raet1bO08603 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.07■□□□□ 0
Raet1bO08603 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Raet1bO08603 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raet1bO08603 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raet1bO08603 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raet1bO08603 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1bO08603 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Raet1bO08603 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.06■□□□□ 0
Raet1bO08603 Odf3b-204ENSMUST00000227834 930 ntBASIC15.06■□□□□ 0
Raet1bO08603 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1bO08603 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Raet1bO08603 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raet1bO08603 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.05■□□□□ 0
Raet1bO08603 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1bO08603 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1bO08603 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Raet1bO08603 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.05■□□□□ -0
Raet1bO08603 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Gm3375-201ENSMUST00000203929 796 ntBASIC15.05■□□□□ -0
Raet1bO08603 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.05■□□□□ -0
Raet1bO08603 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.05■□□□□ -0
Raet1bO08603 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.05■□□□□ -0
Raet1bO08603 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.05■□□□□ -0
Raet1bO08603 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Raet1bO08603 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Raet1bO08603 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.04■□□□□ -0
Raet1bO08603 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.04■□□□□ -0
Raet1bO08603 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.04■□□□□ -0
Raet1bO08603 Mir5122-201ENSMUST00000175004 89 ntBASIC15.04■□□□□ -0
Raet1bO08603 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.04■□□□□ -0
Raet1bO08603 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.04■□□□□ -0
Raet1bO08603 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
Raet1bO08603 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.04■□□□□ -0
Raet1bO08603 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Raet1bO08603 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Raet1bO08603 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms