Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp35M0QWN7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp35M0QWN7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp35M0QWN7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp35M0QWN7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.23■□□□□ 0.51
Usp35M0QWN7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Gm23634-201ENSMUST00000175071 91 ntBASIC18.23■□□□□ 0.51
Usp35M0QWN7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp35M0QWN7 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.23■□□□□ 0.51
Usp35M0QWN7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.22■□□□□ 0.51
Usp35M0QWN7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.22■□□□□ 0.51
Usp35M0QWN7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.22■□□□□ 0.51
Usp35M0QWN7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.22■□□□□ 0.51
Usp35M0QWN7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.21■□□□□ 0.51
Usp35M0QWN7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp35M0QWN7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Gm24841-201ENSMUST00000158676 357 ntBASIC18.2■□□□□ 0.5
Usp35M0QWN7 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.2■□□□□ 0.5
Usp35M0QWN7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp35M0QWN7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.19■□□□□ 0.5
Usp35M0QWN7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.19■□□□□ 0.5
Usp35M0QWN7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Usp35M0QWN7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Usp35M0QWN7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp35M0QWN7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms