Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cpsf4lE9Q2N0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cpsf4lE9Q2N0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cpsf4lE9Q2N0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4lE9Q2N0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Gm2274-201ENSMUST00000184539 609 ntBASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cpsf4lE9Q2N0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Gm7889-201ENSMUST00000185591 958 ntBASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4lE9Q2N0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms