Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx6-2D3Z4R4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx6-2D3Z4R4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx6-2D3Z4R4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx6-2D3Z4R4 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.9□□□□□ -0.19
Nkx6-2D3Z4R4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx6-2D3Z4R4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Serp2-204ENSMUST00000228055 705 ntBASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx6-2D3Z4R4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx6-2D3Z4R4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx6-2D3Z4R4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms