Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Chd6A3KFM7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chd6A3KFM7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Chd6A3KFM7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chd6A3KFM7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chd6A3KFM7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Chd6A3KFM7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gm18187-201ENSMUST00000196476 984 ntBASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Gm43630-201ENSMUST00000201550 776 ntBASIC13.83□□□□□ -0.2
Chd6A3KFM7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Chd6A3KFM7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.82□□□□□ -0.2
Chd6A3KFM7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Chd6A3KFM7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.81□□□□□ -0.2
Chd6A3KFM7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.81□□□□□ -0.2
Chd6A3KFM7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.8□□□□□ -0.2
Chd6A3KFM7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms