Protein–RNA interactions for Protein: A1A535

Veph1, Ventricular zone-expressed PH domain-containing protein 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Veph1A1A535 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.07■□□□□ 0.48
Veph1A1A535 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.07■□□□□ 0.48
Veph1A1A535 Gm27741-201ENSMUST00000185060 237 ntBASIC18.07■□□□□ 0.48
Veph1A1A535 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Veph1A1A535 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Veph1A1A535 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.07■□□□□ 0.48
Veph1A1A535 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.07■□□□□ 0.48
Veph1A1A535 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Veph1A1A535 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Veph1A1A535 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Veph1A1A535 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.06■□□□□ 0.48
Veph1A1A535 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Veph1A1A535 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Veph1A1A535 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Veph1A1A535 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Veph1A1A535 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Veph1A1A535 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Veph1A1A535 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.05■□□□□ 0.48
Veph1A1A535 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Veph1A1A535 Mir770-201ENSMUST00000103252 94 ntBASIC18.05■□□□□ 0.48
Veph1A1A535 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.05■□□□□ 0.48
Veph1A1A535 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Gm17807-201ENSMUST00000186869 298 ntBASIC18.05■□□□□ 0.48
Veph1A1A535 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Veph1A1A535 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.05■□□□□ 0.48
Veph1A1A535 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Veph1A1A535 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Veph1A1A535 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Veph1A1A535 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.04■□□□□ 0.48
Veph1A1A535 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Veph1A1A535 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.04■□□□□ 0.48
Veph1A1A535 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.04■□□□□ 0.48
Veph1A1A535 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Veph1A1A535 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Veph1A1A535 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.03■□□□□ 0.48
Veph1A1A535 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Veph1A1A535 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.03■□□□□ 0.48
Veph1A1A535 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.03■□□□□ 0.48
Veph1A1A535 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.03■□□□□ 0.48
Veph1A1A535 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.03■□□□□ 0.48
Veph1A1A535 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Veph1A1A535 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Veph1A1A535 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Veph1A1A535 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Veph1A1A535 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Veph1A1A535 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.02■□□□□ 0.48
Veph1A1A535 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Veph1A1A535 Gm27000-201ENSMUST00000182943 842 ntBASIC18.02■□□□□ 0.48
Veph1A1A535 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Veph1A1A535 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Veph1A1A535 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Veph1A1A535 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms