Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smim17A0A504 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Smim17A0A504 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.49■□□□□ 0.07
Smim17A0A504 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smim17A0A504 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Smim17A0A504 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.49■□□□□ 0.07
Smim17A0A504 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smim17A0A504 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Smim17A0A504 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Smim17A0A504 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Smim17A0A504 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Smim17A0A504 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.48■□□□□ 0.07
Smim17A0A504 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
Smim17A0A504 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smim17A0A504 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Smim17A0A504 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.47■□□□□ 0.07
Smim17A0A504 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.47■□□□□ 0.07
Smim17A0A504 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.47■□□□□ 0.07
Smim17A0A504 Mir8112-201ENSMUST00000184382 131 ntBASIC15.47■□□□□ 0.07
Smim17A0A504 Gm38205-201ENSMUST00000192243 258 ntBASIC15.47■□□□□ 0.07
Smim17A0A504 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.47■□□□□ 0.07
Smim17A0A504 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Smim17A0A504 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smim17A0A504 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.46■□□□□ 0.07
Smim17A0A504 Gm22325-201ENSMUST00000158904 308 ntBASIC15.46■□□□□ 0.07
Smim17A0A504 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.46■□□□□ 0.07
Smim17A0A504 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Smim17A0A504 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smim17A0A504 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Smim17A0A504 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smim17A0A504 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.46■□□□□ 0.06
Smim17A0A504 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smim17A0A504 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smim17A0A504 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Smim17A0A504 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Smim17A0A504 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.45■□□□□ 0.06
Smim17A0A504 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smim17A0A504 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smim17A0A504 Gm11421-201ENSMUST00000122124 294 ntBASIC15.45■□□□□ 0.06
Smim17A0A504 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.45■□□□□ 0.06
Smim17A0A504 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smim17A0A504 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms