Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Flg-201ENSMUST00000050758 1488 ntBASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Mir8112-201ENSMUST00000184382 131 ntBASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-4A0A0G2JFX3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms