Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9n-2A0A0G2JDP3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.4□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9n-2A0A0G2JDP3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm8520-201ENSMUST00000186517 868 ntBASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm27011-201ENSMUST00000182352 972 ntBASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9n-2A0A0G2JDP3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms