Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav19A0A0B4J1K4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav19A0A0B4J1K4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Gm11643-201ENSMUST00000119578 864 ntBASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav19A0A0B4J1K4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav19A0A0B4J1K4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav19A0A0B4J1K4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav19A0A0B4J1K4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms