Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Gm5921-201ENSMUST00000075898 882 ntBASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3-4A0A075B654 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-4A0A075B654 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-4A0A075B654 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms