Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Asic1-205ENSMUST00000228185 1818 ntBASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Gm43566-201ENSMUST00000196851 808 ntBASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 CT030146.1-201ENSMUST00000220919 217 ntBASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav12-3A0A075B648 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav12-3A0A075B648 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-3A0A075B648 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav12-3A0A075B648 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Gm12366-201ENSMUST00000121722 873 ntBASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Gm5786-201ENSMUST00000085368 882 ntBASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12-3A0A075B648 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12-3A0A075B648 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12-3A0A075B648 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms