Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav8-1A0A075B641 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Gm11421-201ENSMUST00000122124 294 ntBASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav8-1A0A075B641 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Gm9847-201ENSMUST00000052528 599 ntBASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav8-1A0A075B641 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav8-1A0A075B641 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms