Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Gm12896-201ENSMUST00000118430 226 ntBASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Gm15375-201ENSMUST00000119510 849 ntBASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Gm11643-201ENSMUST00000119578 864 ntBASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9n-4A0A075B631 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Gm6576-201ENSMUST00000169678 883 ntBASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav9n-4A0A075B631 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Dio3-201ENSMUST00000097228 1449 ntBASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav9n-4A0A075B631 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9n-4A0A075B631 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trav9n-4A0A075B631 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9n-4A0A075B631 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav9n-4A0A075B631 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav9n-4A0A075B631 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav9n-4A0A075B631 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms