Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7n-5A0A075B604 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-5A0A075B604 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-5A0A075B604 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-5A0A075B604 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav7n-5A0A075B604 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav7n-5A0A075B604 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav7n-5A0A075B604 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav7n-5A0A075B604 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav7n-5A0A075B604 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gm13836-201ENSMUST00000121159 501 ntBASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gm7370-201ENSMUST00000219471 767 ntBASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav7n-5A0A075B604 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav7n-5A0A075B604 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms