Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AP003385.3-201ENST00000472498 287 ntBASIC6.78□□□□□ -1.32
XPAP23025 RN7SL705P-201ENST00000481678 294 ntBASIC6.78□□□□□ -1.32
XPAP23025 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.78□□□□□ -1.32
XPAP23025 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.78□□□□□ -1.32
XPAP23025 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.78□□□□□ -1.32
XPAP23025 AC084851.2-201ENST00000530377 364 ntBASIC6.78□□□□□ -1.32
XPAP23025 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.78□□□□□ -1.32
XPAP23025 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.78□□□□□ -1.32
XPAP23025 AC007068.2-201ENST00000543168 395 ntBASIC6.78□□□□□ -1.32
XPAP23025 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.78□□□□□ -1.32
XPAP23025 AC090888.2-201ENST00000559765 1144 ntBASIC6.78□□□□□ -1.32
XPAP23025 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.78□□□□□ -1.32
XPAP23025 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
XPAP23025 ANP32BP1-202ENST00000568553 737 ntBASIC6.78□□□□□ -1.32
XPAP23025 AC069431.2-201ENST00000604149 1099 ntBASIC6.78□□□□□ -1.32
XPAP23025 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.78□□□□□ -1.32
XPAP23025 AC108359.1-201ENST00000616451 1211 ntBASIC6.78□□□□□ -1.32
XPAP23025 AC009159.2-201ENST00000617603 606 ntBASIC6.78□□□□□ -1.32
XPAP23025 AL645927.2-201ENST00000618350 349 ntBASIC6.78□□□□□ -1.32
XPAP23025 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.78□□□□□ -1.32
XPAP23025 MIR6813-201ENST00000621638 56 ntBASIC6.78□□□□□ -1.32
XPAP23025 SNORA16A-202ENST00000628458 135 ntBASIC6.78□□□□□ -1.32
XPAP23025 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.78□□□□□ -1.32
XPAP23025 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
XPAP23025 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.78□□□□□ -1.32
XPAP23025 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.78□□□□□ -1.32
XPAP23025 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
XPAP23025 RPL31P11-201ENST00000426558 1558 ntBASIC6.78□□□□□ -1.32
XPAP23025 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
XPAP23025 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.78□□□□□ -1.32
XPAP23025 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
XPAP23025 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
XPAP23025 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
XPAP23025 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
XPAP23025 AC007993.1-201ENST00000621298 2430 ntBASIC6.77□□□□□ -1.33
XPAP23025 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
XPAP23025 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 RPL12P13-201ENST00000310055 497 ntBASIC6.77□□□□□ -1.33
XPAP23025 AC007068.1-201ENST00000396690 844 ntBASIC6.77□□□□□ -1.33
XPAP23025 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
XPAP23025 FDPSP5-201ENST00000399474 1057 ntBASIC6.77□□□□□ -1.33
XPAP23025 AL359694.1-201ENST00000403247 604 ntBASIC6.77□□□□□ -1.33
XPAP23025 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 RPS7P12-201ENST00000422385 582 ntBASIC6.77□□□□□ -1.33
XPAP23025 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.77□□□□□ -1.33
XPAP23025 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 ARL5AP3-201ENST00000439327 386 ntBASIC6.77□□□□□ -1.33
XPAP23025 AL121578.2-201ENST00000448797 447 ntBASIC6.77□□□□□ -1.33
XPAP23025 RPL31P20-201ENST00000449593 360 ntBASIC6.77□□□□□ -1.33
XPAP23025 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.77□□□□□ -1.33
XPAP23025 AL445991.1-201ENST00000450381 475 ntBASIC6.77□□□□□ -1.33
XPAP23025 AL009048.1-201ENST00000450437 298 ntBASIC6.77□□□□□ -1.33
XPAP23025 RPL32P14-201ENST00000463196 378 ntBASIC6.77□□□□□ -1.33
XPAP23025 AC021146.5-201ENST00000503544 545 ntBASIC6.77□□□□□ -1.33
XPAP23025 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.77□□□□□ -1.33
XPAP23025 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.77□□□□□ -1.33
XPAP23025 AL390198.2-201ENST00000510553 222 ntBASIC6.77□□□□□ -1.33
XPAP23025 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.77□□□□□ -1.33
XPAP23025 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.77□□□□□ -1.33
XPAP23025 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.77□□□□□ -1.33
XPAP23025 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 LRRC34P1-201ENST00000542742 915 ntBASIC6.77□□□□□ -1.33
XPAP23025 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.77□□□□□ -1.33
XPAP23025 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.77□□□□□ -1.33
XPAP23025 AC091304.4-201ENST00000565703 620 ntBASIC6.77□□□□□ -1.33
XPAP23025 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.77□□□□□ -1.33
XPAP23025 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.77□□□□□ -1.33
XPAP23025 AC098935.2-201ENST00000604222 466 ntBASIC6.77□□□□□ -1.33
XPAP23025 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.77□□□□□ -1.33
XPAP23025 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.77□□□□□ -1.33
XPAP23025 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.77□□□□□ -1.33
XPAP23025 MIR1264-201ENST00000616374 69 ntBASIC6.77□□□□□ -1.33
XPAP23025 AL450226.2-201ENST00000622913 439 ntBASIC6.77□□□□□ -1.33
XPAP23025 TSHZ2-205ENST00000626626 670 ntBASIC6.77□□□□□ -1.33
XPAP23025 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.77□□□□□ -1.33
XPAP23025 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.77□□□□□ -1.33
XPAP23025 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
XPAP23025 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
XPAP23025 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
XPAP23025 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms