Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RPL41P2-201ENST00000544920 409 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 NIFKP4-201ENST00000567275 1192 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC091059.2-201ENST00000623355 614 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AC068213.1-201ENST00000625124 226 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 AP001153.1-201ENST00000641024 338 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 CCNT2P1-201ENST00000423082 1315 ntBASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.95□□□□□ -1.46
CLHC1Q8NHS4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 SNORA43.1-201ENST00000364863 140 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 ARSFP1-201ENST00000398758 477 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 DHFRP2-201ENST00000414224 547 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC002127.1-201ENST00000421305 225 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RPL7AP14-201ENST00000424041 802 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RPS7P14-201ENST00000426405 583 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 PSMD8P1-201ENST00000436275 769 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 PPIAP32-201ENST00000449940 472 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RPA2P3-201ENST00000533268 770 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC037479.1-201ENST00000558361 625 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RNU4ATAC-201ENST00000580972 127 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AL136097.3-201ENST00000611097 505 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC022106.1-201ENST00000612834 766 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AL162377.2-201ENST00000624532 337 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AL133243.2-201ENST00000610331 1621 ntBASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CLHC1Q8NHS4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 RN7SKP257-201ENST00000364525 309 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 RN7SKP151-201ENST00000410230 316 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AC015977.1-201ENST00000418887 292 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AL034369.1-201ENST00000453808 477 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AL445687.2-201ENST00000458156 728 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 RN7SL39P-201ENST00000462264 297 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AL355032.1-201ENST00000472981 438 ntBASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.93□□□□□ -1.46
CLHC1Q8NHS4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms