Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PAX9P55771 COL6A4P2-205ENST00000509855 506 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX9P55771 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX9P55771 COX6B1P4-201ENST00000519826 484 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX9P55771 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX9P55771 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX9P55771 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.08□□□□□ -1.6
PAX9P55771 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.08□□□□□ -1.6
PAX9P55771 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX9P55771 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX9P55771 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.08□□□□□ -1.6
PAX9P55771 MIR5682-201ENST00000584864 76 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.08□□□□□ -1.6
PAX9P55771 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.08□□□□□ -1.6
PAX9P55771 NPIPB1P-202ENST00000588786 828 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AC020915.5-201ENST00000596836 964 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.08□□□□□ -1.6
PAX9P55771 AL133445.2-201ENST00000611191 527 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AC010998.3-201ENST00000613871 631 ntBASIC5.08□□□□□ -1.6
PAX9P55771 MRPL57P3-201ENST00000619218 176 ntBASIC5.08□□□□□ -1.6
PAX9P55771 AP001153.1-201ENST00000641024 338 ntBASIC5.08□□□□□ -1.6
PAX9P55771 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PAX9P55771 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.08□□□□□ -1.6
PAX9P55771 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.08□□□□□ -1.6
PAX9P55771 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
PAX9P55771 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PAX9P55771 WDR95P-201ENST00000425638 1542 ntBASIC5.07□□□□□ -1.6
PAX9P55771 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 QRSL1P3-201ENST00000552666 1316 ntBASIC5.07□□□□□ -1.6
PAX9P55771 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX9P55771 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PAX9P55771 RNU6-819P-201ENST00000364116 107 ntBASIC5.07□□□□□ -1.6
PAX9P55771 RNU6-670P-201ENST00000364312 104 ntBASIC5.07□□□□□ -1.6
PAX9P55771 RN7SKP130-201ENST00000364924 301 ntBASIC5.07□□□□□ -1.6
PAX9P55771 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AC074375.1-201ENST00000372993 192 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AL391419.1-201ENST00000398901 1275 ntBASIC5.07□□□□□ -1.6
PAX9P55771 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.07□□□□□ -1.6
PAX9P55771 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX9P55771 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 GABARAPL3-201ENST00000412799 354 ntBASIC5.07□□□□□ -1.6
PAX9P55771 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 NDUFA5P1-201ENST00000433858 341 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX9P55771 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX9P55771 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 VPS25P1-201ENST00000455691 508 ntBASIC5.07□□□□□ -1.6
PAX9P55771 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 UOX-201ENST00000471089 899 ntBASIC5.07□□□□□ -1.6
PAX9P55771 RPL7AP30-201ENST00000482859 796 ntBASIC5.07□□□□□ -1.6
PAX9P55771 OR9A1P-202ENST00000484361 945 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AF305872.1-201ENST00000485217 471 ntBASIC5.07□□□□□ -1.6
PAX9P55771 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 GOLGA5P1-201ENST00000507317 980 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AC026782.2-201ENST00000510845 636 ntBASIC5.07□□□□□ -1.6
PAX9P55771 MIR4800-201ENST00000537353 80 ntBASIC5.07□□□□□ -1.6
PAX9P55771 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX9P55771 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 AC004890.3-201ENST00000605566 1095 ntBASIC5.07□□□□□ -1.6
PAX9P55771 SNORD96A-201ENST00000606577 79 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AC012511.1-201ENST00000608140 449 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AC008833.1-201ENST00000611633 691 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AC104307.1-201ENST00000616142 196 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AL031658.2-201ENST00000616850 651 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AC005753.1-201ENST00000623837 618 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AL356094.1-201ENST00000624663 1212 ntBASIC5.07□□□□□ -1.6
PAX9P55771 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.07□□□□□ -1.6
PAX9P55771 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.07□□□□□ -1.6
PAX9P55771 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PAX9P55771 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PAX9P55771 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PAX9P55771 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.07□□□□□ -1.6
PAX9P55771 OR51C1P-202ENST00000641159 1444 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms