Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL034379.1-201ENST00000423216 253 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 MTCO3P17-201ENST00000443775 513 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AL445687.2-201ENST00000458156 728 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.59□□□□□ -1.35
CTNNA1P35221 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.59□□□□□ -1.35
CTNNA1P35221 RPS7P11-201ENST00000484240 586 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AL035690.1-201ENST00000490892 383 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 MINOS1P4-201ENST00000515470 318 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 RNA5SP75-201ENST00000516841 111 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 IGKV2-19-201ENST00000518132 283 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.59□□□□□ -1.35
CTNNA1P35221 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AC089984.3-201ENST00000552838 363 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC023968.1-201ENST00000560719 475 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.59□□□□□ -1.35
CTNNA1P35221 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.59□□□□□ -1.35
CTNNA1P35221 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.59□□□□□ -1.35
CTNNA1P35221 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AL589863.1-201ENST00000595383 631 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.59□□□□□ -1.35
CTNNA1P35221 AL512430.4-201ENST00000603085 613 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC009237.12-201ENST00000604755 742 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC006924.1-201ENST00000610750 559 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 AC027506.1-201ENST00000621395 198 ntBASIC6.59□□□□□ -1.35
CTNNA1P35221 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.59□□□□□ -1.35
CTNNA1P35221 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA1P35221 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CTNNA1P35221 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.59□□□□□ -1.36
CTNNA1P35221 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.59□□□□□ -1.36
CTNNA1P35221 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
CTNNA1P35221 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.59□□□□□ -1.36
CTNNA1P35221 FANCD2P2-201ENST00000437591 1400 ntBASIC6.59□□□□□ -1.36
CTNNA1P35221 DNM1P47-203ENST00000571780 12667 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC022164.1-201ENST00000568767 2673 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 CCNT2P1-201ENST00000423082 1315 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.58□□□□□ -1.36
CTNNA1P35221 RN7SKP221-201ENST00000410420 301 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 AL390879.1-201ENST00000439143 386 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 snoU13.29-201ENST00000459370 104 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 RN7SL714P-201ENST00000487050 298 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AP001960.1-201ENST00000506494 658 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.58□□□□□ -1.36
CTNNA1P35221 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC010343.2-201ENST00000510162 224 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC008429.4-201ENST00000521201 182 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.58□□□□□ -1.36
CTNNA1P35221 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.58□□□□□ -1.36
CTNNA1P35221 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 NPIPB1P-202ENST00000588786 828 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC027334.1-201ENST00000603257 310 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 MIR6737-201ENST00000617385 70 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 MIR6849-201ENST00000618543 69 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 AC004023.1-201ENST00000561473 1744 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 MSL3P1-202ENST00000440028 1468 ntBASIC6.58□□□□□ -1.36
CTNNA1P35221 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CTNNA1P35221 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CTNNA1P35221 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CTNNA1P35221 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CTNNA1P35221 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms