Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BX005040.2-201ENST00000620504 370 ntBASIC4.42□□□□□ -1.7
CKS2P33552 SNX18P12-201ENST00000624821 759 ntBASIC4.42□□□□□ -1.7
CKS2P33552 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS2P33552 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS2P33552 AC099654.15-201ENST00000639802 509 ntBASIC4.42□□□□□ -1.7
CKS2P33552 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS2P33552 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CKS2P33552 THAP12P9-201ENST00000503971 2360 ntBASIC4.42□□□□□ -1.7
CKS2P33552 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CKS2P33552 AC024651.2-201ENST00000562480 2098 ntBASIC4.42□□□□□ -1.7
CKS2P33552 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CKS2P33552 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.42□□□□□ -1.7
CKS2P33552 AC126474.2-201ENST00000623268 1750 ntBASIC4.42□□□□□ -1.7
CKS2P33552 AP005435.3-201ENST00000531260 3198 ntBASIC4.42□□□□□ -1.7
CKS2P33552 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CKS2P33552 AL360270.2-201ENST00000562952 5985 ntBASIC4.42□□□□□ -1.7
CKS2P33552 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CKS2P33552 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CKS2P33552 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS2P33552 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 RN7SKP166-201ENST00000410812 305 ntBASIC4.41□□□□□ -1.7
CKS2P33552 SETP22-201ENST00000412243 957 ntBASIC4.41□□□□□ -1.7
CKS2P33552 PTCD2P2-201ENST00000415579 1095 ntBASIC4.41□□□□□ -1.7
CKS2P33552 MTND2P40-201ENST00000436718 841 ntBASIC4.41□□□□□ -1.7
CKS2P33552 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS2P33552 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 ACA64.4-201ENST00000459070 127 ntBASIC4.41□□□□□ -1.7
CKS2P33552 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS2P33552 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS2P33552 AC105420.1-201ENST00000504389 582 ntBASIC4.41□□□□□ -1.7
CKS2P33552 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 AC093878.1-201ENST00000515630 432 ntBASIC4.41□□□□□ -1.7
CKS2P33552 AC107952.1-201ENST00000524200 376 ntBASIC4.41□□□□□ -1.7
CKS2P33552 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CKS2P33552 AL132640.2-202ENST00000559732 614 ntBASIC4.41□□□□□ -1.7
CKS2P33552 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.41□□□□□ -1.7
CKS2P33552 AL163952.1-202ENST00000569625 600 ntBASIC4.41□□□□□ -1.7
CKS2P33552 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 AC006115.2-201ENST00000596823 202 ntBASIC4.41□□□□□ -1.7
CKS2P33552 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 AL121782.1-201ENST00000611242 413 ntBASIC4.41□□□□□ -1.7
CKS2P33552 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 AL442128.2-201ENST00000620246 1824 ntBASIC4.41□□□□□ -1.7
CKS2P33552 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS2P33552 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS2P33552 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS2P33552 AC011416.1-201ENST00000514947 1732 ntBASIC4.41□□□□□ -1.7
CKS2P33552 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.4□□□□□ -1.7
CKS2P33552 AL161912.4-201ENST00000623889 2468 ntBASIC4.4□□□□□ -1.7
CKS2P33552 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CKS2P33552 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.4□□□□□ -1.7
CKS2P33552 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.4□□□□□ -1.7
CKS2P33552 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.4□□□□□ -1.7
CKS2P33552 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.4□□□□□ -1.7
CKS2P33552 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS2P33552 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CKS2P33552 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.4□□□□□ -1.7
CKS2P33552 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS2P33552 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.4□□□□□ -1.7
CKS2P33552 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS2P33552 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.4□□□□□ -1.7
CKS2P33552 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CKS2P33552 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms