Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 RAB28P3-201ENST00000448325 597 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC106872.4-201ENST00000510050 523 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC108103.1-201ENST00000511286 446 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 RNU6-319P-201ENST00000516025 108 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC002519.2-203ENST00000567043 837 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AL589863.1-201ENST00000595383 631 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC009955.2-201ENST00000597288 542 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 AL445649.1-201ENST00000615941 691 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC018659.2-201ENST00000624690 715 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC073488.6-201ENST00000632293 754 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 PSMC1P6-201ENST00000477233 1319 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 MTND4P21-201ENST00000453886 1357 ntBASIC8.95□□□□□ -0.98
USP35Q9P2H5 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
USP35Q9P2H5 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.95□□□□□ -0.98
USP35Q9P2H5 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 AL356968.2-201ENST00000412769 1257 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 Z68694.1-201ENST00000413929 841 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 RPL17P17-201ENST00000419491 557 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 RPS3P2-201ENST00000421346 701 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 NPM1P26-201ENST00000426339 738 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC104843.2-201ENST00000427666 297 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 MRPS33P4-201ENST00000434892 317 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 TVP23CP1-201ENST00000450317 639 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC084754.1-201ENST00000463466 464 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC074386.1-201ENST00000476560 767 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC096743.1-201ENST00000485172 319 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC021146.11-201ENST00000503319 491 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 ABCA11P-202ENST00000504019 2110 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC146944.3-201ENST00000509969 371 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 NANOGNBP2-201ENST00000544753 553 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 CTSLP2-201ENST00000580501 394 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 MIR4443-201ENST00000585052 53 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC245052.7-201ENST00000601161 359 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC073111.2-201ENST00000605657 1075 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC108865.2-201ENST00000606881 432 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 AC183089.2-201ENST00000637931 916 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
USP35Q9P2H5 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
USP35Q9P2H5 CDY7P-201ENST00000429883 1604 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 AL355377.1-201ENST00000621125 1653 ntBASIC8.94□□□□□ -0.98
USP35Q9P2H5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USP35Q9P2H5 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USP35Q9P2H5 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USP35Q9P2H5 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USP35Q9P2H5 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USP35Q9P2H5 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 LCN1P2-201ENST00000372030 223 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 RNU11-6P-201ENST00000391127 133 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 AMZ2P2-201ENST00000406819 1057 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 AC017035.1-201ENST00000411999 1115 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 RPSAP65-201ENST00000429660 595 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USP35Q9P2H5 ARL5AP3-201ENST00000439327 386 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 RPL31P20-201ENST00000449593 360 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 NPM1P19-201ENST00000450070 712 ntBASIC8.93□□□□□ -0.98
USP35Q9P2H5 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.93□□□□□ -0.98
USP35Q9P2H5 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms