Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 OR7A11P-201ENST00000597719 953 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC005229.3-201ENST00000603438 323 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC091768.1-201ENST00000609258 930 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC239803.2-201ENST00000610161 430 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 TCL6_3.1-201ENST00000619064 137 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 SNORA16A-202ENST00000628458 135 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 MIR4302-201ENST00000638058 60 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC125336.1-201ENST00000508893 2827 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 FAM32BP-201ENST00000344033 333 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 RPS26P38-201ENST00000414476 348 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 RNA5SP441-201ENST00000516809 88 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL845552.1-201ENST00000556820 323 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC011447.2-201ENST00000592921 283 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL359704.2-201ENST00000604335 521 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL365181.4-201ENST00000609800 547 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AL354718.1-201ENST00000619764 589 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC005514.1-201ENST00000623521 208 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM4Q9C037 AC010132.4-201ENST00000569883 1368 ntBASIC6.43□□□□□ -1.38
TRIM4Q9C037 Z97989.1-201ENST00000531702 2421 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 MTCO1P11-201ENST00000429111 1528 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC019178.1-201ENST00000392337 440 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 PEX12P1-201ENST00000400284 1048 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 DPPA2P2-201ENST00000418220 897 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 RPS17P17-201ENST00000419392 409 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 IPPKP1-201ENST00000422501 768 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC069154.1-201ENST00000432914 542 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC110602.1-201ENST00000437414 318 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 DNAJA1P5-201ENST00000440278 943 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 CRYGGP-201ENST00000443337 145 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 MEF2AP1-201ENST00000454867 863 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AL096803.1-201ENST00000456921 1021 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 RPL7P51-201ENST00000490532 749 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC025283.1-201ENST00000572039 734 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 MIR4502-201ENST00000580432 81 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC007255.2-201ENST00000604053 631 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 AC004241.2-201ENST00000614562 444 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 MIR6886-201ENST00000619864 61 ntBASIC6.42□□□□□ -1.38
TRIM4Q9C037 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM4Q9C037 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM4Q9C037 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms