Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 CASP1P2-201ENST00000526830 1258 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 AL121579.2-201ENST00000555466 590 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 RN7SL131P-201ENST00000579043 256 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 WDR45BP1-201ENST00000583470 1029 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC015911.5-201ENST00000587076 451 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AC012254.5-201ENST00000623573 478 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC005753.1-201ENST00000623837 618 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC4Q92889 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.4□□□□□ -1.23
ERCC4Q92889 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC4Q92889 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
ERCC4Q92889 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC4Q92889 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC4Q92889 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.4□□□□□ -1.23
ERCC4Q92889 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
ERCC4Q92889 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
ERCC4Q92889 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 STAG3L4-201ENST00000352103 530 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 MIR27A-201ENST00000385073 78 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 RNA5SP115-201ENST00000411160 107 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 RPL18AP14-201ENST00000417685 526 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 PPIAP23-201ENST00000420099 497 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 MTND1P10-201ENST00000426108 832 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC009362.1-201ENST00000427253 406 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
ERCC4Q92889 MTND2P2-201ENST00000434633 945 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC009237.1-201ENST00000442127 744 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 RPL26P30-201ENST00000453533 435 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 RPL36AP55-201ENST00000454114 305 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 AC018639.1-201ENST00000492994 442 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 GTF2IP9-201ENST00000502460 301 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 MRPL57P6-201ENST00000506570 309 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 OR52H2P-201ENST00000514607 902 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
ERCC4Q92889 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
ERCC4Q92889 AC068339.2-201ENST00000534395 618 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 SLC25A51P2-201ENST00000535708 889 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC007068.2-201ENST00000543168 395 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.39□□□□□ -1.23
ERCC4Q92889 AC027176.2-201ENST00000559166 746 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.39□□□□□ -1.23
ERCC4Q92889 PPIAP14-201ENST00000577627 496 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC027216.1-201ENST00000577726 685 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 MIR378C-201ENST00000578683 81 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 MIR3159-201ENST00000584572 74 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 BNIP3P38-201ENST00000601117 544 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC091193.1-201ENST00000604640 448 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 AC116165.3-201ENST00000614524 400 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC005277.2-201ENST00000617898 390 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AL121985.3-201ENST00000620690 523 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 AC027559.1-201ENST00000636288 271 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.39□□□□□ -1.23
ERCC4Q92889 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ERCC4Q92889 AP000432.2-201ENST00000624164 2048 ntBASIC7.39□□□□□ -1.23
ERCC4Q92889 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.38□□□□□ -1.23
ERCC4Q92889 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.38□□□□□ -1.23
ERCC4Q92889 AC062022.1-201ENST00000451026 1684 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ERCC4Q92889 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.38□□□□□ -1.23
ERCC4Q92889 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.38□□□□□ -1.23
ERCC4Q92889 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
ERCC4Q92889 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
ERCC4Q92889 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
ERCC4Q92889 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ERCC4Q92889 RN7SKP189-201ENST00000365042 330 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 SNORA70H-201ENST00000383910 135 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 SNORA70J-201ENST00000384182 135 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 RNA5SP35-201ENST00000391257 129 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 AC092646.1-201ENST00000427142 901 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 ETF1P1-206ENST00000427296 984 ntBASIC7.38□□□□□ -1.23
ERCC4Q92889 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms