Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 TMSB4XP4-201ENST00000323496 618 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC023490.2-201ENST00000359859 470 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 SNORA70H-201ENST00000383910 135 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 SNORA70J-201ENST00000384182 135 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL360271.1-201ENST00000395679 510 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL139805.1-201ENST00000407837 289 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AL133351.3-201ENST00000454998 193 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 FTH1P8-201ENST00000498161 514 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 OR7E99P-201ENST00000505750 922 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC095052.1-201ENST00000509955 863 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 RARSP1-201ENST00000542842 1418 ntBASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM3Q8TF72 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 MIR1178-201ENST00000408396 91 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 RPS14P4-201ENST00000415880 418 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC005017.1-201ENST00000482002 490 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 NPIPB14P-203ENST00000532298 987 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC022106.1-201ENST00000612834 766 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC022467.1-201ENST00000614738 749 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 RFPL4AP6-201ENST00000616792 846 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC127024.8-201ENST00000623719 2094 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC119674.1-213ENST00000641177 1386 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 FBXL21-201ENST00000297158 1305 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 WBP11P1-201ENST00000562560 1931 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 OR13K1P-201ENST00000444577 975 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 KHDC1P1-201ENST00000511053 508 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 Y_RNA.710-201ENST00000516975 110 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 MIR3176-201ENST00000582210 90 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 AC006924.1-201ENST00000610750 559 ntBASIC6.37□□□□□ -1.39
SHROOM3Q8TF72 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AKAP17BP-201ENST00000431706 2719 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AOX3P-204ENST00000491025 2107 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms