Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm22870-201ENSMUST00000157501 112 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm25300-201ENSMUST00000175284 84 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Mir7222-201ENSMUST00000183740 75 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm28097-201ENSMUST00000187333 366 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm45652-201ENSMUST00000210926 3831 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm23302-201ENSMUST00000082710 100 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Gm25205-201ENSMUST00000082841 103 ntBASIC4.84□□□□□ -1.63
Trim35Q8C006 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim35Q8C006 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim35Q8C006 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim35Q8C006 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim35Q8C006 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm25524-201ENSMUST00000101821 107 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm14671-201ENSMUST00000121790 262 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm22387-201ENSMUST00000158191 131 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm16289-201ENSMUST00000162079 183 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm24510-201ENSMUST00000174965 94 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm43524-201ENSMUST00000197278 298 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim35Q8C006 AC157278.1-201ENSMUST00000221621 148 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm7665-201ENSMUST00000076710 297 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Gm22220-201ENSMUST00000082671 149 ntBASIC4.83□□□□□ -1.64
Trim35Q8C006 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim35Q8C006 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim35Q8C006 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Trim35Q8C006 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim35Q8C006 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim35Q8C006 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim35Q8C006 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim35Q8C006 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim35Q8C006 Gm25466-201ENSMUST00000103995 132 ntBASIC4.82□□□□□ -1.64
Trim35Q8C006 Gm14937-201ENSMUST00000119709 208 ntBASIC4.82□□□□□ -1.64
Trim35Q8C006 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim35Q8C006 Gm5215-201ENSMUST00000054380 405 ntBASIC4.82□□□□□ -1.64
Trim35Q8C006 Mir30c-2-201ENSMUST00000083633 84 ntBASIC4.82□□□□□ -1.64
Trim35Q8C006 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.82□□□□□ -1.64
Trim35Q8C006 Mir1a-1-201ENSMUST00000093635 77 ntBASIC4.82□□□□□ -1.64
Trim35Q8C006 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim35Q8C006 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim35Q8C006 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim35Q8C006 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim35Q8C006 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim35Q8C006 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim35Q8C006 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm24117-201ENSMUST00000103973 133 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm14299-201ENSMUST00000117586 397 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm12423-201ENSMUST00000118334 135 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm12309-201ENSMUST00000119889 182 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm23477-201ENSMUST00000158882 128 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm23799-201ENSMUST00000175559 120 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm25870-201ENSMUST00000179845 79 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Mir6376-201ENSMUST00000185149 131 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm44824-201ENSMUST00000207021 229 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Mir411-201ENSMUST00000083543 82 ntBASIC4.81□□□□□ -1.64
Trim35Q8C006 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim35Q8C006 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Trim35Q8C006 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim35Q8C006 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim35Q8C006 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim35Q8C006 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Trim35Q8C006 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim35Q8C006 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim35Q8C006 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm23879-201ENSMUST00000116874 126 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm12858-201ENSMUST00000121913 208 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm22732-201ENSMUST00000158093 121 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 AC122769.2-201ENSMUST00000227248 302 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 AC160550.1-201ENSMUST00000228659 181 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm26265-201ENSMUST00000083277 135 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim35Q8C006 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.8□□□□□ -1.64
Trim35Q8C006 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim35Q8C006 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm26490-201ENSMUST00000157879 140 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm24188-201ENSMUST00000157980 108 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm25558-201ENSMUST00000158083 106 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm24226-201ENSMUST00000158826 97 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm43899-201ENSMUST00000203675 246 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Mir215-201ENSMUST00000083628 112 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.79□□□□□ -1.64
Trim35Q8C006 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim35Q8C006 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim35Q8C006 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms