Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SPTA1P02549 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 AL391422.1-201ENST00000402155 436 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 BX284632.2-201ENST00000421091 399 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 GAPDHP75-201ENST00000433910 943 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AL512605.1-202ENST00000441919 381 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 Z80107.2-201ENST00000445127 392 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AL359955.2-201ENST00000445380 353 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 AC090616.1-201ENST00000583895 447 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.74□□□□□ -1.49
SPTA1P02549 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SPTA1P02549 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 AC106872.5-201ENST00000508856 1416 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AP003119.3-201ENST00000566747 4192 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.74□□□□□ -1.49
SPTA1P02549 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
SPTA1P02549 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 THADA-202ENST00000402360 2974 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 AP001527.1-201ENST00000566440 1957 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.74□□□□□ -1.49
SPTA1P02549 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 AL354890.1-201ENST00000413730 346 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 RPL34P3-201ENST00000421454 338 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 IGLV3-4-201ENST00000432300 244 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SPTA1P02549 RN7SL705P-201ENST00000481678 294 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AC112225.1-201ENST00000508230 297 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 OR9L1P-201ENST00000529493 933 ntBASIC5.74□□□□□ -1.49
SPTA1P02549 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC5.74□□□□□ -1.49
SPTA1P02549 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SPTA1P02549 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.74□□□□□ -1.49
SPTA1P02549 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.74□□□□□ -1.49
SPTA1P02549 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.74□□□□□ -1.49
SPTA1P02549 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SPTA1P02549 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 PDZK1P1-202ENST00000425209 1350 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 AC109780.1-201ENST00000451768 1344 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 AL356967.1-201ENST00000406305 431 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 RN7SKP279-201ENST00000411383 298 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 GSTA6P-201ENST00000424144 582 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 STRADBP1-201ENST00000478954 1281 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 AL117339.4-201ENST00000608335 7063 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 AC025470.1-201ENST00000510053 2032 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 AL096816.1-201ENST00000623300 2920 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 OR52B3P-201ENST00000314715 928 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SPTA1P02549 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.73□□□□□ -1.49
SPTA1P02549 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC5.73□□□□□ -1.49
SPTA1P02549 ULK4P2-202ENST00000564187 492 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms