Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 RPS7P3-201ENST00000443360 580 ntBASIC10.01□□□□□ -0.81
IFT140Q96RY7 AC092824.1-201ENST00000483524 576 ntBASIC10.01□□□□□ -0.81
IFT140Q96RY7 MRPS16P1-201ENST00000523462 412 ntBASIC10.01□□□□□ -0.81
IFT140Q96RY7 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 MIR3691-201ENST00000578066 90 ntBASIC10.01□□□□□ -0.81
IFT140Q96RY7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
IFT140Q96RY7 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC10.01□□□□□ -0.81
IFT140Q96RY7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC10□□□□□ -0.81
IFT140Q96RY7 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
IFT140Q96RY7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
IFT140Q96RY7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
IFT140Q96RY7 AL109941.1-201ENST00000401925 229 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 RPL7P61-201ENST00000451721 751 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 AC079841.1-201ENST00000481228 950 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 RPSAP50-201ENST00000481955 852 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 AC008629.2-201ENST00000503783 483 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC10□□□□□ -0.81
IFT140Q96RY7 AP000676.2-201ENST00000529711 301 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC10□□□□□ -0.81
IFT140Q96RY7 MIR3189-201ENST00000578735 73 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 AC104785.1-201ENST00000603220 588 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 LAPTM4BP2-201ENST00000604542 446 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 AC027348.2-201ENST00000624375 642 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IFT140Q96RY7 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 AC079753.1-201ENST00000623243 3868 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 AL035555.1-201ENST00000404462 1790 ntBASIC10□□□□□ -0.81
IFT140Q96RY7 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC10□□□□□ -0.81
IFT140Q96RY7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC10□□□□□ -0.81
IFT140Q96RY7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC10□□□□□ -0.81
IFT140Q96RY7 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 Z99129.4-201ENST00000624649 2435 ntBASIC9.99□□□□□ -0.81
IFT140Q96RY7 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 SNRPEP6-201ENST00000407465 277 ntBASIC9.99□□□□□ -0.81
IFT140Q96RY7 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 OR56A7P-201ENST00000524865 941 ntBASIC9.99□□□□□ -0.81
IFT140Q96RY7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 AC090510.2-201ENST00000617465 629 ntBASIC9.99□□□□□ -0.81
IFT140Q96RY7 AC136428.4-201ENST00000634254 1155 ntBASIC9.99□□□□□ -0.81
IFT140Q96RY7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 AC026951.1-201ENST00000559530 2459 ntBASIC9.99□□□□□ -0.81
IFT140Q96RY7 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
IFT140Q96RY7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
IFT140Q96RY7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC009804.1-201ENST00000400949 179 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 RN7SKP166-201ENST00000410812 305 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 PSMD10P3-201ENST00000437000 448 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 CUBNP2-201ENST00000443534 1139 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC005297.1-201ENST00000444765 862 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 FAR2P1-206ENST00000449736 709 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 FRG2FP-204ENST00000453982 852 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms