Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 RPS13P2-201ENST00000437890 455 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 SNX18P9-201ENST00000440580 835 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 SLAMF6P1-201ENST00000451067 602 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 AC126615.1-201ENST00000470084 630 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 EIF3LP3-201ENST00000495197 822 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.74□□□□□ -1.65
CXCL1P09341 AC020937.1-201ENST00000519677 1013 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 CIPC-206ENST00000555611 599 ntTSL 4 BASIC4.74□□□□□ -1.65
CXCL1P09341 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.74□□□□□ -1.65
CXCL1P09341 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.74□□□□□ -1.65
CXCL1P09341 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 RN7SL208P-201ENST00000577964 296 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 MIR1273F-201ENST00000580581 99 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 SETP3-201ENST00000581726 813 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 WDR45BP1-201ENST00000583470 1029 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 HNRNPA3P9-201ENST00000604913 979 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AL592504.1-201ENST00000605319 439 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 AL008723.3-201ENST00000608926 449 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 FRG2MP-201ENST00000613317 856 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 AC007671.1-201ENST00000616957 830 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 FKBP1AP4-201ENST00000631775 336 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CXCL1P09341 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 AC239868.2-201ENST00000564237 4527 ntBASIC4.74□□□□□ -1.65
CXCL1P09341 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.74□□□□□ -1.65
CXCL1P09341 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CXCL1P09341 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.74□□□□□ -1.65
CXCL1P09341 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 PSMC1P6-201ENST00000477233 1319 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
CXCL1P09341 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CXCL1P09341 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CXCL1P09341 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL1P09341 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 GLYATL1P1-201ENST00000528297 1607 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL1P09341 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC074375.1-201ENST00000372993 192 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 RPL5P20-201ENST00000403848 896 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AL136100.1-201ENST00000407696 330 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 AL136231.1-201ENST00000429407 730 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 PUDPP2-201ENST00000431423 643 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.73□□□□□ -1.65
CXCL1P09341 UBBP5-201ENST00000446970 266 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 RN7SL314P-201ENST00000490735 292 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AC022206.1-201ENST00000495947 347 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 AP005902.2-201ENST00000518393 307 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 COX6B1P4-201ENST00000519826 484 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.73□□□□□ -1.65
CXCL1P09341 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.73□□□□□ -1.65
CXCL1P09341 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.73□□□□□ -1.65
CXCL1P09341 AL132640.2-202ENST00000559732 614 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL1P09341 NPIPB1P-202ENST00000588786 828 ntBASIC4.73□□□□□ -1.65
CXCL1P09341 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms