Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 OR7E161P-202ENST00000641994 1033 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 AC020978.8-201ENST00000571975 3022 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 LRRC37A12P-201ENST00000454917 1801 ntBASIC9.02□□□□□ -0.97
ZC3H4Q9UPT8 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 MBP-206ENST00000397863 4800 ntTSL 3 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 MKI67P1-201ENST00000604297 1460 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 SNORD116.1-201ENST00000365628 92 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AL353133.1-201ENST00000407695 401 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 BTF3P8-201ENST00000414577 526 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 SPATA20P1-201ENST00000423089 438 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 DPRXP1-201ENST00000426312 460 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 ELOCP23-201ENST00000452014 332 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AC023050.1-201ENST00000498198 304 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 OR4A40P-201ENST00000533878 948 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AC136619.2-201ENST00000563361 631 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CLPTM1LP1-201ENST00000604519 484 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AL096855.2-201ENST00000605785 369 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 OR2BH1P-201ENST00000608850 864 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AC012676.3-201ENST00000614983 479 ntBASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
ZC3H4Q9UPT8 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 LINC00294-201ENST00000631190 3306 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC020978.6-201ENST00000571197 3177 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 MFSD8-256ENST00000641949 1640 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 SNORD56.4-201ENST00000363883 71 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 BECN1P2-201ENST00000407947 812 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 RN7SKP205-201ENST00000410999 307 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 NPM1P36-201ENST00000415681 835 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 GLUD1P9-201ENST00000420997 1173 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 Z74696.2-201ENST00000436514 498 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AL354941.1-201ENST00000438600 464 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 BUD31P2-201ENST00000449374 300 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 RNU7-157P-201ENST00000459600 66 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 RN7SL325P-201ENST00000460434 283 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 RN7SL332P-201ENST00000482163 254 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 DCAF13P2-201ENST00000514188 555 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms