Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC019257.2-201ENST00000605539 497 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 MIR8082-201ENST00000612488 81 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC135068.11-201ENST00000636378 921 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 AC005725.1-201ENST00000577346 2607 ntBASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
ATG4AQ8WYN0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 RBPJP6-201ENST00000411556 1431 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 RNA5SP478-201ENST00000364657 115 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 RN7SKP237-201ENST00000364663 301 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL360271.1-201ENST00000395679 510 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL391419.1-201ENST00000398901 1275 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 RNU4-64P-201ENST00000410795 131 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 MTND4LP17-201ENST00000414607 293 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 PTPN2P1-201ENST00000423212 1072 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL691517.1-201ENST00000440833 1235 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL022237.1-201ENST00000446663 358 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC119751.4-201ENST00000507498 357 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC104997.1-201ENST00000519761 717 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 OR10D4P-201ENST00000525892 951 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC130366.1-201ENST00000526505 1192 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 BNIP3P40-201ENST00000596017 556 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AL391834.1-201ENST00000609609 560 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AC074141.1-201ENST00000588129 2995 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 AOX3P-204ENST00000491025 2107 ntBASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ATG4AQ8WYN0 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 ZNF658B-201ENST00000602828 3408 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 SNORD35A-201ENST00000363389 86 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 MIR138-2-201ENST00000384916 84 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 AL451046.1-201ENST00000406097 534 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 RN7SKP281-201ENST00000410472 352 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 AL512504.1-201ENST00000415494 778 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 AL672212.1-201ENST00000422246 400 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 BMP6P1-201ENST00000431230 679 ntBASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.6□□□□□ -1.35
ATG4AQ8WYN0 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms