Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 RPSAP32-201ENST00000432681 526 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 GAPDHP59-201ENST00000435908 267 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AL445687.2-201ENST00000458156 728 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 RPL29P23-201ENST00000486188 442 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 RPL12P30-201ENST00000488389 499 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 RN7SL568P-201ENST00000493069 298 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AP001804.1-201ENST00000526868 919 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC011500.1-201ENST00000601963 469 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 uc_338.29-201ENST00000615099 168 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC092724.1-201ENST00000624623 3397 ntBASIC6.6□□□□□ -1.35
LMO3Q8TAP4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LMO3Q8TAP4 AC034229.2-201ENST00000566945 2508 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC005831.1-201ENST00000624384 1697 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 SNORA70.9-201ENST00000384370 135 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 RPS15AP30-201ENST00000420976 390 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 RPSAP65-201ENST00000429660 595 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 BMP6P1-201ENST00000431230 679 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AL731534.1-201ENST00000434711 269 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC007383.1-201ENST00000445875 636 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 TPM3P3-201ENST00000521343 354 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC021269.1-201ENST00000526860 705 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC244502.2-201ENST00000543361 851 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC119403.2-201ENST00000590960 598 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
LMO3Q8TAP4 AC016583.1-201ENST00000624221 2431 ntBASIC6.59□□□□□ -1.35
LMO3Q8TAP4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
LMO3Q8TAP4 ZNF101P1-201ENST00000435701 1720 ntBASIC6.59□□□□□ -1.36
LMO3Q8TAP4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
LMO3Q8TAP4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
LMO3Q8TAP4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 PRNCR1-201ENST00000635449 12727 ntBASIC6.58□□□□□ -1.36
LMO3Q8TAP4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 SNORA21-201ENST00000362423 132 ntBASIC6.58□□□□□ -1.36
LMO3Q8TAP4 RN7SKP250-201ENST00000363924 321 ntBASIC6.58□□□□□ -1.36
LMO3Q8TAP4 RNU105B-201ENST00000364478 208 ntBASIC6.58□□□□□ -1.36
LMO3Q8TAP4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 OR3D1P-201ENST00000438288 955 ntBASIC6.58□□□□□ -1.36
LMO3Q8TAP4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.58□□□□□ -1.36
LMO3Q8TAP4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms