Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC092634.1-201ENST00000366505 199 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SLC28A1O00337 OR52N3P-201ENST00000413417 934 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC28A1O00337 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC245884.2-201ENST00000426257 404 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 AC244033.1-201ENST00000426826 870 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 AL645939.3-201ENST00000435408 225 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 AL445687.2-201ENST00000458156 728 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 RPL5P33-201ENST00000487833 905 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC28A1O00337 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC28A1O00337 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.04□□□□□ -1.44
SLC28A1O00337 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AC023080.1-201ENST00000551663 931 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 RN7SL657P-201ENST00000582431 293 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 Z93930.3-201ENST00000607919 749 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AL589743.6-201ENST00000611025 117 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AL352984.2-202ENST00000613699 155 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 MIR6849-201ENST00000618543 69 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 AL136984.1-201ENST00000607611 1893 ntBASIC6.04□□□□□ -1.44
SLC28A1O00337 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SLC28A1O00337 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC28A1O00337 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC28A1O00337 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC28A1O00337 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AC002075.1-201ENST00000457396 676 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AL079303.1-201ENST00000486611 463 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 MTCO1P55-201ENST00000489829 745 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 CYP4F27P-201ENST00000514557 494 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC28A1O00337 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SLC28A1O00337 DPPA3P2-202ENST00000557188 1219 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AC068408.1-201ENST00000577406 1144 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 AC027229.1-201ENST00000583887 253 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 GLYATL1P2-202ENST00000588046 902 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 AC027334.1-201ENST00000603257 310 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AC018690.1-201ENST00000608144 626 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 AL354950.1-201ENST00000614150 568 ntBASIC6.03□□□□□ -1.44
SLC28A1O00337 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
SLC28A1O00337 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SLC28A1O00337 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.03□□□□□ -1.44
SLC28A1O00337 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.02□□□□□ -1.45
SLC28A1O00337 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.02□□□□□ -1.45
SLC28A1O00337 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SLC28A1O00337 FANCD2P2-201ENST00000437591 1400 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms