Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 HSPD1P9-201ENST00000420325 1636 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 RNU105B-201ENST00000364478 208 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 LCN1P2-201ENST00000372030 223 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 SNORA70H-201ENST00000383910 135 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 SNORA70J-201ENST00000384182 135 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 RPL17P2-201ENST00000491913 451 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AC090115.2-201ENST00000548060 883 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 MIR4502-201ENST00000580432 81 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AC027334.1-201ENST00000603257 310 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AC004801.6-201ENST00000616571 978 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 AC096861.1-201ENST00000616652 240 ntBASIC8.34□□□□□ -1.07
NPC1L1Q9UHC9 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.08
NPC1L1Q9UHC9 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
NPC1L1Q9UHC9 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RNA5SP433-201ENST00000364491 114 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RPL35AP31-201ENST00000418340 337 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 SEPT14P12-201ENST00000442280 560 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RBMY2AP-201ENST00000445405 1157 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RBMY2CP-201ENST00000448575 1157 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RBMY2DP-202ENST00000448881 1157 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RBMY2BP-202ENST00000451071 1156 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC008945.1-201ENST00000505144 499 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 UGT2A3P7-201ENST00000510485 734 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC007346.1-201ENST00000569208 867 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC002310.3-201ENST00000569728 723 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 AC022400.9-201ENST00000623633 273 ntBASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NPC1L1Q9UHC9 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC008627.1-201ENST00000517511 1704 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 MIR130B-202ENST00000385018 82 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 RNA5SP156-201ENST00000410250 110 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC115283.1-201ENST00000427353 400 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 RPL7L1P3-201ENST00000455249 689 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC112187.1-201ENST00000455837 479 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC073594.1-201ENST00000462065 364 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC244502.2-201ENST00000543361 851 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 LINC00556-201ENST00000569603 412 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC025262.3-201ENST00000623666 360 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AP001052.1-201ENST00000626421 99 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 AC073488.3-201ENST00000631611 778 ntBASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NPC1L1Q9UHC9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms