Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS29Q9UBQ0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VPS29Q9UBQ0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC079248.1-201ENST00000427568 1546 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 RNU4-64P-201ENST00000410795 131 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 RN7SKP121-201ENST00000410842 305 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC016027.5-201ENST00000427227 210 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC112492.2-201ENST00000432774 1030 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 RPEP4-201ENST00000437636 602 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC073594.1-201ENST00000462065 364 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 OR4D12P-201ENST00000509361 911 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AL589765.6-201ENST00000601909 549 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AC027334.1-201ENST00000603257 310 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 MIR6885-201ENST00000612241 66 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 GAPDHP41-201ENST00000613707 975 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 MIR6811-201ENST00000620409 58 ntBASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VPS29Q9UBQ0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 SNORA43.1-201ENST00000364863 140 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 SNORA70.9-201ENST00000384370 135 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AL121835.1-201ENST00000404250 354 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 PPIAP10-201ENST00000438675 458 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC112187.1-201ENST00000455837 479 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 SLC25A51P1-201ENST00000468432 871 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 CYP4F27P-201ENST00000514557 494 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC092865.1-201ENST00000544395 1023 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 OR7A1P-202ENST00000641542 1158 ntBASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS29Q9UBQ0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms