Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RANP6-201ENST00000413691 644 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 ARAFP1-201ENST00000422172 605 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 GAPDHP57-201ENST00000424400 585 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 AC066616.1-201ENST00000486795 413 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 AC026956.1-201ENST00000558741 396 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 MIR4301-201ENST00000577203 66 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 AC091133.5-201ENST00000603088 301 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 AL162233.1-201ENST00000620014 944 ntBASIC9.03□□□□□ -0.96
USP35Q9P2H5 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
USP35Q9P2H5 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
USP35Q9P2H5 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
USP35Q9P2H5 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 MAPK10-379ENST00000642013 1385 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 MIR365B-201ENST00000362317 111 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 RNU6-316P-201ENST00000391027 107 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL358178.1-201ENST00000407698 397 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 RNA5SP198-201ENST00000410376 127 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 RPS21P8-201ENST00000413365 247 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 MTND2P11-201ENST00000423638 648 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL606490.8-201ENST00000441624 319 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 MORF4L1P4-201ENST00000450245 976 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 BZW1P1-201ENST00000454901 1240 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC083806.1-201ENST00000468934 316 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 NPM1P21-201ENST00000513394 762 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC020923.1-201ENST00000624021 917 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 MAPK10-350ENST00000641777 965 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL163152.1-201ENST00000642001 374 ntBASIC9.02□□□□□ -0.97
USP35Q9P2H5 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
USP35Q9P2H5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
USP35Q9P2H5 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
USP35Q9P2H5 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
USP35Q9P2H5 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
USP35Q9P2H5 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
USP35Q9P2H5 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
USP35Q9P2H5 AC062029.1-202ENST00000606164 3651 ntBASIC9.01□□□□□ -0.97
USP35Q9P2H5 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
USP35Q9P2H5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.01□□□□□ -0.97
USP35Q9P2H5 CA10-204ENST00000570565 2276 ntTSL 5 BASIC9.01□□□□□ -0.97
USP35Q9P2H5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms