Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 BX284613.1-201ENST00000452221 1641 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC022905.1-201ENST00000503430 3048 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 CASC19-243ENST00000641588 1546 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AL050335.1-201ENST00000396909 869 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 RPL5P20-201ENST00000403848 896 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 PSMD8P1-201ENST00000436275 769 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC092106.2-201ENST00000436597 487 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 MTCO3P43-201ENST00000440974 771 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 PPIAP32-201ENST00000449940 472 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 OR52I1-201ENST00000450052 1050 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 CCNJP1-201ENST00000450600 1149 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 RPSAP24-201ENST00000461543 873 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC063955.1-201ENST00000462872 685 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 RPL23AP64-201ENST00000469465 435 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC022206.1-201ENST00000495947 347 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC091965.3-201ENST00000506236 208 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC021146.10-201ENST00000515628 706 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 OR8K2P-201ENST00000524645 927 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 RPL29P33-201ENST00000587474 316 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 U91328.4-201ENST00000608919 517 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 OR51C1P-202ENST00000641159 1444 ntBASIC7.34□□□□□ -1.23
CDK5RAP3Q96JB5 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC010624.4-201ENST00000597606 1351 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC067942.1-201ENST00000488045 1493 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AL451136.1-201ENST00000435399 325 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AP000949.1-201ENST00000438328 629 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 NPM1P23-201ENST00000440193 849 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC236972.4-201ENST00000458091 963 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC093827.1-201ENST00000480094 861 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 RPL5P14-201ENST00000494197 878 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 SCARNA5-201ENST00000516201 276 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC092718.4-201ENST00000566639 716 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC020978.7-201ENST00000575953 1187 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 CYCSP1-201ENST00000604815 315 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC008833.1-201ENST00000611633 691 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 MIR6774-201ENST00000614651 70 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AL132640.3-201ENST00000630473 177 ntBASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.33□□□□□ -1.24
CDK5RAP3Q96JB5 AC130360.2-201ENST00000533477 1556 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms