Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AP000432.2-201ENST00000624164 2048 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 RNU1-5P-201ENST00000362684 144 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AL589794.1-201ENST00000424971 390 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC083862.1-201ENST00000427378 1242 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 MED28P4-201ENST00000433137 572 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 HMGN1P32-201ENST00000441744 256 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AL022237.1-201ENST00000446663 358 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 MARK2P8-201ENST00000476069 952 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 OR9A1P-202ENST00000484361 945 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC012123.2-201ENST00000485809 248 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC093664.1-201ENST00000511779 289 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 OR9G2P-201ENST00000533326 880 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 TPRX1P1-201ENST00000557620 319 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 RN7SL475P-201ENST00000583379 298 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC021422.1-201ENST00000621212 473 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AC027506.1-201ENST00000621395 198 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AL353743.3-201ENST00000442109 1468 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 RPL31P11-201ENST00000426558 1558 ntBASIC6.06□□□□□ -1.44
CLHC1Q8NHS4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 SHQ1P1-201ENST00000437111 1544 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 RN7SKP186-201ENST00000365371 303 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 RNU1-84P-201ENST00000365447 164 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 MIR431-201ENST00000385266 114 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 RNA5SP231-201ENST00000410496 138 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 MEAF6P1-201ENST00000416092 327 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 AC016839.1-201ENST00000578162 867 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 MIR3189-201ENST00000578735 73 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 AC074141.1-201ENST00000588129 2995 ntBASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
CLHC1Q8NHS4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.04□□□□□ -1.44
CLHC1Q8NHS4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms