Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 VN1R54P-201ENST00000435210 1049 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC097527.1-201ENST00000437031 530 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC093582.1-201ENST00000447086 385 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC103563.5-201ENST00000455643 364 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 HNRNPCP7-201ENST00000456056 905 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 IGKV1-6-201ENST00000464162 380 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 RPSAP36-201ENST00000465940 869 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 RN7SL865P-201ENST00000466711 289 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AL121769.1-201ENST00000469473 401 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 ACTR3P3-201ENST00000480448 893 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AL121612.1-201ENST00000490252 615 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 IGKV1-9-201ENST00000493819 409 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 IGKV1-5-201ENST00000496168 532 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 LINC02217-203ENST00000508677 296 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC109811.2-201ENST00000509609 452 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC010342.1-201ENST00000514047 877 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AP003122.1-201ENST00000527402 755 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AP000781.2-202ENST00000529411 681 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 CBX3P7-201ENST00000532876 502 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC004706.2-201ENST00000576277 294 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AL161729.4-201ENST00000604650 476 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC020728.1-201ENST00000605749 1216 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AL359921.2-201ENST00000608547 543 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC010333.3-201ENST00000615100 402 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC135068.9-201ENST00000628927 355 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC112206.2-203ENST00000513234 1556 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 TSSK4-202ENST00000339917 1321 ntAPPRIS ALT1 TSL 2 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 OR11H5P-202ENST00000641612 1325 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 AC025040.2-201ENST00000558657 1852 ntBASIC10.25□□□□□ -0.77
RTN4Q9NQC3 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RTN4Q9NQC3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 OR14K1-201ENST00000283225 945 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 FGGY-202ENST00000371210 1041 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 RNU6-657P-201ENST00000383904 107 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC073091.1-201ENST00000398059 864 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 FCF1P10-201ENST00000407590 479 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 PRYP1-201ENST00000412474 445 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 PRYP2-201ENST00000416652 492 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AL162431.1-202ENST00000422858 444 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 SLC25A15P2-201ENST00000457292 338 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 RPS15AP17-201ENST00000470598 390 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 RPS4XP17-201ENST00000479057 754 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC024589.1-201ENST00000512207 263 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 COX6B1P4-201ENST00000519826 484 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 ADIPOR1P2-201ENST00000554199 820 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 MT1E-203ENST00000568293 332 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AP001180.3-201ENST00000582221 145 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC016629.3-202ENST00000596427 890 ntTSL 2 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AL031281.2-201ENST00000606754 748 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC098614.4-201ENST00000607601 462 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC104458.1-201ENST00000608243 463 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AP000894.4-201ENST00000610185 483 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AL136097.3-201ENST00000611097 505 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC005609.4-201ENST00000625071 447 ntBASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AL021368.4-201ENST00000637710 675 ntTSL 3 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
RTN4Q9NQC3 AC007842.1-201ENST00000597336 2039 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms