Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Gm12085-201ENSMUST00000119263 940 ntBASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cldn9Q9Z0S7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn9Q9Z0S7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.38■□□□□ 0.21
Cldn9Q9Z0S7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Gm38027-201ENSMUST00000192315 235 ntBASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.37■□□□□ 0.21
Cldn9Q9Z0S7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Gm9731-201ENSMUST00000209480 747 ntBASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn9Q9Z0S7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms