Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cldn3Q9Z0G9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Cldn3Q9Z0G9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldn3Q9Z0G9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldn3Q9Z0G9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Il3ra-202ENSMUST00000223589 738 ntBASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldn3Q9Z0G9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldn3Q9Z0G9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms