Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cx3cr1Q9Z0D9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cr1Q9Z0D9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Flg-201ENSMUST00000050758 1488 ntBASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cr1Q9Z0D9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cx3cr1Q9Z0D9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Cx3cr1Q9Z0D9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Cx3cr1Q9Z0D9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Gm10033-202ENSMUST00000211874 928 ntBASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Gm18671-201ENSMUST00000214826 683 ntBASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cr1Q9Z0D9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cx3cr1Q9Z0D9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms