Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a2Q9JLR1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Gm12382-201ENSMUST00000122005 922 ntBASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Sec61a2Q9JLR1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Gm10252-201ENSMUST00000209541 832 ntBASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sec61a2Q9JLR1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Gm43183-201ENSMUST00000200632 547 ntBASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.34■□□□□ 0.05
Sec61a2Q9JLR1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a2Q9JLR1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a2Q9JLR1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a2Q9JLR1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sec61a2Q9JLR1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Gm37292-201ENSMUST00000192062 758 ntBASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sec61a2Q9JLR1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms