Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rfx5Q9JL61 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Mir1668-201ENSMUST00000184114 107 ntBASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rfx5Q9JL61 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rfx5Q9JL61 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18■□□□□ 0.47
Rfx5Q9JL61 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rfx5Q9JL61 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 AC134329.2-201ENSMUST00000217897 428 ntBASIC18■□□□□ 0.47
Rfx5Q9JL61 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rfx5Q9JL61 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rfx5Q9JL61 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rfx5Q9JL61 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rfx5Q9JL61 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Gm22697-201ENSMUST00000175194 63 ntBASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfx5Q9JL61 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfx5Q9JL61 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rfx5Q9JL61 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rfx5Q9JL61 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rfx5Q9JL61 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfx5Q9JL61 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms